From owner-nwchem-users@emsl.pnl.gov Thu Jan 11 09:27:09 2007 Received: from odyssey.emsl.pnl.gov (localhost [127.0.0.1]) by odyssey.emsl.pnl.gov (8.13.8/8.13.8) with ESMTP id l0BHR8Ow019209 for ; Thu, 11 Jan 2007 09:27:09 -0800 (PST) Received: (from majordom@localhost) by odyssey.emsl.pnl.gov (8.13.8/8.13.8/Submit) id l0BHR80K019208 for nwchem-users-outgoing-0915; Thu, 11 Jan 2007 09:27:08 -0800 (PST) X-Authentication-Warning: odyssey.emsl.pnl.gov: majordom set sender to owner-nwchem-users@emsl.pnl.gov using -f X-IronPort-AV: i="4.13,174,1167638400"; d="scan'208"; a="11475941:sNHT26132134" Message-ID: <45A67369.3080704@pnl.gov> Date: Thu, 11 Jan 2007 09:27:05 -0800 From: Dunyou Wang User-Agent: Thunderbird 1.5.0.9 (X11/20061206) MIME-Version: 1.0 To: Francesco Pietra CC: nwchem-users@emsl.pnl.gov, "Black, Gary D" , "Peterson, Michael R" Subject: Re: [NWCHEM] reading stereochemistry References: <67467.44585.qm@web58912.mail.re1.yahoo.com> In-Reply-To: <67467.44585.qm@web58912.mail.re1.yahoo.com> Content-Type: text/plain; charset=iso-8859-1 Content-Transfer-Encoding: 7bit X-OriginalArrivalTime: 11 Jan 2007 17:27:05.0721 (UTC) FILETIME=[B6DDBE90:01C735A5] Sender: owner-nwchem-users@emsl.pnl.gov Precedence: bulk Dear Francesco, I'll forward your question to our ECCE people here. They can answer you how to bundle NWChem with ECCE. Best regards Dunyou Francesco Pietra wrote: > Hope not to have overlooked my question already on > FAQ. Trivial question anyway. > > I am organizing to use nwchem 5.0 as single user on > parallel machine running amd64 debian linux. tar.bz2 > downloaded and decompressed. > > Ecce downloaded (Full and Builder, not checked yet if > download succeeded correctly) on nearby pc running > i386 debian linux. > > Just to start, I should be able to create input files > to nwchem from templates, filling in cartesian > coordinates I get from my MM package. That package > can't read the nwchem output (unless it is similar to > mpqc, gamess, gaussian), however, and from the sole > cartesian coordinates in the nwchem output file I > cannot easily reconstruct the molecule with my MM > package in order to read the "geometry optimized" bond > angles, dihedral angle, and bond lengths. Is Ecce able > to do the job or reading such stereochemical data from > the nwchem output? If so, is the Ecce Builder > sufficient, or should I install the full Ecce release > (single user I do not need server)? Stereochemical > details, and not energies only, are essential for my > work on natural products with no repeating units. > > Thanks a lot for suggesting me the shortest > installation path, or directing me where these affairs > are already explained. > > Cheers > francesco pietra > > > > > > ____________________________________________________________________________________ > Any questions? Get answers on any topic at www.Answers.yahoo.com. Try it now. > >