From owner-nwchem-users@emsl.pnl.gov Wed Feb 7 10:37:07 2007 Received: from odyssey.emsl.pnl.gov (localhost [127.0.0.1]) by odyssey.emsl.pnl.gov (8.13.8/8.13.8) with ESMTP id l17Ib6X9029930 for ; Wed, 7 Feb 2007 10:37:07 -0800 (PST) Received: (from majordom@localhost) by odyssey.emsl.pnl.gov (8.13.8/8.13.8/Submit) id l17Ib6CG029929 for nwchem-users-outgoing-0915; Wed, 7 Feb 2007 10:37:06 -0800 (PST) X-Authentication-Warning: odyssey.emsl.pnl.gov: majordom set sender to owner-nwchem-users@emsl.pnl.gov using -f X-IronPort-AV: i="4.13,296,1167638400"; d="scan'208"; a="13151078:sNHT27566826" Message-ID: <45CA1C48.80900@pnl.gov> Date: Wed, 07 Feb 2007 10:36:56 -0800 From: Eric Bylaska User-Agent: Thunderbird 1.5.0.9 (Macintosh/20061207) MIME-Version: 1.0 To: Francesco Pietra CC: users nwchem Subject: Re: [NWCHEM] NWPW References: <568189.95159.qm@web58911.mail.re1.yahoo.com> In-Reply-To: <568189.95159.qm@web58911.mail.re1.yahoo.com> Content-Type: text/plain; charset=ISO-8859-1; format=flowed Content-Transfer-Encoding: 7bit X-OriginalArrivalTime: 07 Feb 2007 18:37:03.0295 (UTC) FILETIME=[F5F7F4F0:01C74AE6] Sender: owner-nwchem-users@emsl.pnl.gov Precedence: bulk Francesco, The following type of input can be used to define a unit cell for an isolated molecule. I've included some optional input parameters as comments, "# ..." If you want to see the code that generates the unit cell and ngrid look at the subroutines control_ngrid_default, control_find_box,..., in the file nwchem/src/nwpw/nwpwlib/control.F Hope that helps Eric Title "Automatically determine unitcell and ngrid" start unitcell_test memory 900 mb #permanent_dir ./perm #scratch_dir ./perm geometry .... your geometry here.... end nwpw simulation_cell boundary_conditions aperiodic #box_delta 5.0 #defines the minimum distance bohrs from molecule edge to cell boundary #box_orient #if set the unit cell will orient itself along moments of inertia #box_different_lengths #if set the unit cell will try to use different side lengths end energy_cutoff 40.0 #in units of Hartrees, default is 30.0 Hartrees (40Hartrees=80Ry) xc pbe96 #note only LDA and PBE96, revPBE, and PBE0 are currently available with pspw mapping 2 #use a 2d-hilbert FFT- allows different values for ngrid. Default FFT requires ngrid(2)==ngrid(3) end #set nwpw:lcao_skip .true. task pspw energy Francesco Pietra wrote: > Hi all: > I have not found on internet a guidance as to setting > the pspw module (ch. 36.7 of manual, simulation-cell, > boundary-conditions, SC, ngrid and what else needed) > for large organic molecules (not polymers, just 100 > atoms, or so, without repeating units). Are any > indications available? > > Thanks > francesco pietra > > > > > ____________________________________________________________________________________ > Need Mail bonding? > Go to the Yahoo! Mail Q&A for great tips from Yahoo! Answers users. > http://answers.yahoo.com/dir/?link=list&sid=396546091 >