From owner-nwchem-users@emsl.pnl.gov Mon May 19 09:44:20 2008 Received: from odyssey.emsl.pnl.gov (localhost.pnl.gov [127.0.0.1]) by odyssey.emsl.pnl.gov (8.14.1/8.14.1) with ESMTP id m4JGiJTU013446 for ; Mon, 19 May 2008 09:44:20 -0700 (PDT) Received: (from majordom@localhost) by odyssey.emsl.pnl.gov (8.14.1/8.14.1/Submit) id m4JGiJ73013445 for nwchem-users-outgoing-0915; Mon, 19 May 2008 09:44:19 -0700 (PDT) X-Authentication-Warning: odyssey.emsl.pnl.gov: majordom set sender to owner-nwchem-users@emsl.pnl.gov using -f X-Ironport-SG: OK_Domains X-Ironport-SBRS: 2.4 X-IronPort-Anti-Spam-Filtered: true X-IronPort-Anti-Spam-Result: AtEBALhKMUhCxGRbfGdsb2JhbACSLwEBCwUCBgcRA5oQ X-IronPort-AV: E=Sophos;i="4.27,510,1204531200"; d="scan'208";a="76321769" DomainKey-Signature: a=rsa-sha1; q=dns; c=nofws; s=s1024; d=yahoo.com; h=X-YMail-OSG:Received:X-Mailer:Date:From:Reply-To:Subject:To:MIME-Version:Content-Type:Message-ID; b=NDKt04Ax1Ipe4tFH68NXRu0h55LKfHc8dJ80et1NmFQjI6kVbv33Q8nt+tvp+FTq/LDlMZnFvqxzxtwaneuK0Bx5+3D7UPHNKfo2lRvnRu1IfNzAVYz4LeUjLr6qwRaLclTp98BKMcM8DMO37zXeBhNjNLJyvZiusKkoijDJ4IY=; X-YMail-OSG: QEsKbRwVM1lAz76HXaVR95YOQqpBH0E6Cosu2554CJQRH97pHCEfvEQkK_thERxrSKVqGxfI5_onY2w1_s2c0IusNLE6R_gxn4_45A-- X-Mailer: YahooMailWebService/0.7.185 Date: Mon, 19 May 2008 09:44:12 -0700 (PDT) From: Francesco Pietra Reply-To: chiendarret@yahoo.com Subject: [NWCHEM] MKL libraries To: users nwchem MIME-Version: 1.0 Content-Type: text/plain; charset=us-ascii Message-ID: <131791.17788.qm@web57609.mail.re1.yahoo.com> Sender: owner-nwchem-users@emsl.pnl.gov Precedence: bulk nwchem 5.1 was installed from binary nwchem-5.1-LINUX64-RHELWS4-ifort-AMD64.tar.bz2 on a NUMA-type machine with two dual-opteron, runtime provided by intel version 9. OS debian Linux amd64 etch. The two raid1 HHDDs have been moved to a new 4-socket dual-opteron NUMA-type machine; nwchem worked fine. Now, on the latter machine, I upgraded the OS to "lenny", intel compilers to vers 10.0.1.014 with MKL libraries 10.0.1.014 added, openmpi to vers 10.1 with libnuma vers 1.0.2-1. As I have noticed a tremendous speed up by the mkl libraries of the QMMM part of a molecular dynamics package, I wonder whether using mkl libraries for nwchem in my type of system might be beneficial. If so, should I build nwchem from source with intel compilers on openmpi? Is it a list of flags to that scope, or the binary you provide is anyway expected to be faster? Thanks francesco pietra